10 CSR 20-6.300
Concentrated Animal Feeding Operations
PURPOSE: This rule sets forth the requirements and procedures
for operating permits for concentrated animal feeding operations.
Minimum federal requirements are incorporated, and additional
state requirements are included to provide increased environmen
tal protection of sensitive watersheds.
PUBLISHER’S NOTE: The secretary of state has determined that the
publication of the entire text of the material which is incorporated
by reference as a portion of this rule would be unduly cumbersome
or expensive. This material as incorporated by reference in this rule
shall be maintained by the agency at its headquarters and shall be
made available to the public for inspection and copying at no more
than the actual cost of reproduction. This note applies only to the
reference material. The entire text of the rule is printed here.
(1) Definitions.
(A) Definitions as set forth in 10 CSR 20-2.010 and 10 CSR 208.300 shall apply to the terms when used in this rule unless
otherwise defined in subsection (B) below.
(B) Other applicable definitions are incorporated as follows:
1. Animal—Domestic animals, fowls, or other types of live
stock except for aquatic animals;
2. Animal unit—A unit of measurement to compare vari
ous animal types at an animal feeding operation. One (1) ani
mal unit equals the following: 1.0 beef cow or feeder, cow/calf
pair, veal calf, or dairy heifer; 0.5 horse; 0.7 mature dairy cow;
2.5 swine weighing over 55 pounds; 10 swine weighing less
than 55 pounds; 10 sheep, lamb, or meat and dairy goats; 30
chicken laying hens or broilers with a wet handling system; 82
chicken laying hens without a wet handling system; 55 turkeys
in grow-out phase; 125 chicken broilers, chicken pullets, or
turkey poults in brood phase without a wet handling system;
3. Animal unit equivalent—Any unique animal type, not
listed, that has a similar manure characteristic as one (1) of the
listed animal unit categories. The department shall make the
determination of an animal unit equivalent based upon ma
nure characteristics that include manure volume and nutrient
concentration;
4. Animal feeding operation (AFO)—A lot, building, or
complex at an operating location where animals are stabled
or confined and fed or maintained for a total of forty-five (45)
days or more in any twelve- (12-) month period, and crops,
vegetation, forage growth, or post-harvest residues cannot be
sustained over at least fifty percent (50%) of the animal confine
ment area within the normal crop growing season;
5. Catastrophic storm event—A precipitation event of
twenty-four- (24-) hour duration that exceeds the twenty-five-
(25-) year, twenty-four- (24-) hour storm event as defined by
the most recent publication of the National Weather Service
Climate Atlas;
6. Chronic weather event—The chronic weather event
will be based upon an evaluation of the ten (10) year return
rainfall frequency over a ten- (10-) day, ninety- (90-) day, one
hundred eighty- (180-) day, and three hundred sixty-five- (365-)
day operating period. It is preferred the University of Missouri’s
Missouri Climate Center will determine, within a reasonable
time frame, when a chronic weather event is occurring for any
given county in the state;
7. Class I and Class II operation—An AFO or CAFO’s class
size is based on the operating level in animal units of an indi
vidual animal type at one (1) operating location. Once a CAFO
becomes a Class I operation, the animal units of all confined
animals at the operating location are summed to determine
whether the operation is Class IA, IB, or IC. Operations that are
smaller than the Class II category are considered unclassified.
The class categories, sorted by animal type, are presented in
the following chart:
1 Animal Unit =
1.0
Beef cow, feeder, veal calf,
cow/calf pair, and dairy heifer
10
Sheep, lambs, and meat and dairy goats
0.5
Horses
30
Chicken laying hens, pullets, and
broilers with a wet handling system
0.7
Mature Dairy cows
2.5
Swine weighing over 55 pounds
55
Turkeys in grow-out phase
10
Swine weighing under 55 pounds
82
Chicken laying hens without a wet
handling system
5
Ducks with a wet handling
system
125
Chicken broilers and pullets, and turkey
poults in brood phase, all without a wet
handling system
300
Ducks without a wet handling
system
Animal Class Category
Animal Class Category
Class IA
7,000
AUs*
Class IB
3,000 to 6,999
AUs*
Class IC
1,000 to 2,999
AUs*
Class II
300 to 999
AUs*
Beef cows, feeder
cattle, veal calves,
cow/calf pairs, and
dairy heifers
7,000
3,000 to 6,999
1,000 to 2,999
300 to 999
Horses
3,500
1,500 to 3,499
500 to 1,499
150 to 499
Mature Dairy Cows
4,900
2,100 to 4,899
700 to 2,099
200 to 699
Swine weighing over
55 pounds
17,500
7,500 to
17,499
2,500 to 7,499
750 to 2,499
Swine weighing under
55 pounds
70,000
30,000 to
69,999
10,000 to
29,999
3,000 to 9,999
Sheep, lambs, and meat
and dairy goats
70,000
30,000 to
69,999
10,000 to
29,999
3,000 to 9,999
Chicken laying hens,
pullets, and broilers
with a wet handling
system
210,000
90,000 to
209,999
30,000 to
89,999
9,000 to
29,999
Chicken laying hens
without a wet handling
system
574,000
246,000 to
573,999
82,000 to
245,999
24,500 to
81,999
Turkeys in grow-out
phase
385,000
165,000 to
384,999
55,000 to
164,999
16,500 to
54,999
Chicken broilers and
pullets, and turkey
poults in brood phase,
all without a wet
handling system
875,000
375,000 to
874,999
125,000 to
374,999
37,500 to
124,999
Ducks without a wet
handling system
210,000
90,000 to
209,999
30,000 to
89,999
10,000 to
29,999
Ducks with a wet
handling system
35,000
15,000 to
34,999
5,000 to 14,999
1,500 to 4,999
*Animal Units
8. Concentrated animal feeding operation (CAFO)—An
AFO that meets one (1) of the following criteria:
A. Class I operation;
B. Class II operation where either one (1) of the following
conditions are met:
(I) Pollutants are discharged into waters of the state
through a manmade ditch, flush system, or other similar manmade device; or
(II) Pollutants are discharged directly into waters of
the state which originate outside of and pass over, across, or
through the production area or otherwise come into contact
with the animals confined in the operation; or
C. An unclassified operation that is designated as a CAFO
in accordance with subsection (2)(D) of this rule;
9. Critical watersheds—defined as the following:
A. Watersheds for public drinking water lakes (L1 lakes
defined in 10 CSR 20-7.031 and identified in Table G);
B. Watersheds located upstream away from the dam
from all drinking water intake structures on lakes including
the watershed of Table Rock Lake;
C. Areas in the watershed and within five (5) miles
upstream of any stream or river drinking water intake struc
ture, other than those intake structures on the Missouri and
Mississippi Rivers; and
D. Watersheds of the Current (headwaters to Northern
Ripley County Line), Eleven Point (headwaters to Hwy. 142), and
Jacks Fork (headwaters to mouth) Rivers;
10. Discharge—A CAFO is said to discharge when it is de
signed, constructed, operated, or maintained such that a dis
charge of process waste to surface waters of the state will occur.
A CAFO that discharges could include one (1) that continuously
discharges process wastewater to surface waters of the state, as
well as one that may only have an intermittent and sporadic
discharge. Discharges of agricultural storm water is a nonpoint
source and therefore not included within this definition;
11. Dry process waste—A process waste mixture which
may include manure, litter, or compost (including bedding,
compost, mortality by-products, or other raw materials which
is commingled with manure) and has less than seventy-five
percent (75%) moisture content and does not contain any free
draining liquids;
12. Flush system—Any animal waste moving or remov
ing system utilizing the force of periodic liquid flushing as
the primary mechanism for removing manure from animal
containment buildings, as opposed to a primarily mechanical
or automatic device. This definition does not include confine
ment buildings that utilize deep or shallow underfloor pits
with pull plug devices;
13. Land application area—Agricultural land which is
under the operational control of the CAFO owner or operator,
whether it is owned, rented, or leased, to which manure, litter,
or process wastewater from the production area is or may be
applied;
14. Multi-year phosphorus application—Phosphorus ap
plied to a field in excess of the crop needs for that year. When
multi-year phosphorus applications are followed, no additional
manure, litter, or process wastewater is applied to the same
land in subsequent years until the applied phosphorus has
been removed from the field via harvest and crop removal or
until subsequent soil testing allows for nitrogen-based rates;
15. No-discharge operation—A CAFO is considered no-dis
charge if the operation is designed, constructed, operated, and
maintained in a manner such that the CAFO will not discharge
to waters of the state. A discharge of agricultural storm water
is a nonpoint source and therefore not included within this
definition;
16. Occupied residence—A residential dwelling which is
inhabited at least fifty percent (50%) of the year;
17. Operating location—For purposes of determining CAFO
classification, an operating location includes all contiguous
lands owned, operated, or controlled by one (1) person or by
two (2) or more persons jointly or as tenants in common or
noncontiguous lands if they use a common area for the land
application of wastes. State and county roads are not consid
ered property boundaries for purposes of this rule. Two (2) or
more animal feeding operations under a common ownership
are considered to be a single animal feeding operation if they
adjoin each other or if they use a common area for the land
application of wastes;
18. Overflow—The discharge of process wastewater result
ing from the filling of wastewater or manure storage structures
beyond the point at which no more manure, process wastewa
ter, or stormwater can be contained by the structure;
19. Process wastewater—Water which carries or contains
manure, including manure commingled with litter, compost,
or other animal production waste materials used in the opera
tion of the CAFO. Also includes water directly or indirectly used
in the operation of the CAFO for any or all of the following:
spillage or overflow from confined animal or poultry watering
systems; washing, cleaning, or flushing pens, barns, manure
pits, or other CAFO facilities; and water resulting from the
washing, or spray cooling of confined animals. Process waste
water also includes any water which comes into contact with
any raw materials, products, or by-products feed, milk, eggs,
or bedding;
20. Production area—The non-vegetated portions of an
operation where manure, litter, or process wastewater from
the AFO is generated, stored, and/or managed. The production
area includes the animal confinement area, the manure storage
area, the raw materials storage area, and the waste containment
areas. The animal confinement area includes, but is not limited
to, open lots, housed lots, feedlots, confinement houses, stall
barns, free stall barns, milkrooms, milking centers, cowyards,
barnyards, medication pens, walkers, animal walkways, and
stables. The manure storage area includes, but is not limited to,
lagoons, runoff ponds, storage sheds, stockpiles, under house or
pit storages, liquid impoundments, static piles, and composting
piles. The raw materials storage area includes, but is not limited
to, feed and silage, silos, pads, and bunkers, and bedding mate
rials. The waste containment area includes, but is not limited
to, settling basins and areas within berms and diversions which
separate uncontaminated storm water. Also included in the defi
nition of production area is any egg washing or egg processing
operation and any area used in the storage, treatment, or dis
posal of animal mortalities;
21. Public building—A building open to and used routinely
by the public for public purposes;
22. Vegetated buffer—A narrow, permanent strip of dense
perennial vegetation established parallel to the contours of
and perpendicular to the dominant slope of the field for the
purposes of slowing water runoff, enhancing water infiltration,
and minimizing the risk of any potential nutrients or pollut
ants from leaving the field and reaching surface waters;
23. Waste management system—Includes all structures
and equipment, used to collect, store, transfer, or treat manure,
litter, and/or process waste water. A waste management system
will be considered in operation when animals are placed in
confinement; and
24. Wet handling system—Wet handling system is the han
dling of process wastewater that contains more than seventy
five percent (75%) moisture content or has free draining liquids.
A wet handling system includes, but is not limited to, lagoons,
pits, tanks, all gravity outfall lines, recycle pump stations, recy
cle force mains, and appurtenances.
(2) Applicability and Application for Coverage.
(A) Scope of Rule. This rule applies solely to manure, litter,
and/or process wastewater management systems at concen
trated animal feeding operations (CAFOs). CAFOs are point
sources and are subject to both state and federal National
Pollutant Discharge Elimination System (NPDES) regulations in
accordance with sections 640.710 and 644.026, RSMo.
(B) Permit Coverage Required—Any CAFO owner or operator
shall obtain one (1) of the operating permits listed below prior
to operating a waste management system at a concentrated
animal feeding operation unless otherwise exempted under
subsection (2)(E) of this rule:
1. NPDES general or site-specific operating permits—Owners
or operators of Class I CAFOs that discharge and Class II AFOs
that are defined or designated as a CAFO, must obtain an NPDES
operating permit. Class I CAFOs that do not discharge may also
apply for coverage under an NPDES operating permit;
2. State no-discharge operating permit—Owners or oper
ators of Class I CAFOs that do not discharge and do not apply
for coverage under an NPDES operating permit shall obtain
and maintain coverage under a state no-discharge operating
permit.
(C) CAFO Designation at Class II Size AFOs.
1. The department may designate an AFO as a concen
trated animal feeding operation upon determining that it is a
significant contributor of pollutants to waters of the state. In
making such designation, the department shall consider the
following factors:
A. The size of the AFO and the amount of wastes reach
ing waters of the state;
B. The location of the AFO relative to waters of the state;
C. The means of conveyance of animal wastes and pro
cess waste into waters of the state;
D. The slope, vegetation, rainfall, and other factors affect
ing the likelihood or frequency of discharge of animal wastes
manure and process waste into waters of the state; and
E. Other relevant factors.
2. No AFO shall be designated under this section unless
the department has conducted an on-site inspection of the
operation and determined that the operation should and could
be regulated as a concentrated animal feeding operation. In
addition, no AFO with number of animals below a Class II size
operation may be designated as a CAFO unless—
A. Pollutants are discharged into waters of the state
through a manmade ditch, flushing system, or other similar
manmade device; or
B. Pollutants are discharged directly into the waters of
the state which originate outside of the AFO and pass over,
across, or through the AFO, or otherwise come into direct con
tact with the animals confined in the operation.
(D) Exemptions.
1. In accordance with section 640.758, RSMo, livestock
markets and auctions are exempt from the provisions of 10 CSR
20-6.300(3)(B)–(C), 10 CSR 20-6.300(3)(H), and 10 CSR 20-6.300(7).
2. Permits are not required for nonpoint source discharges,
agricultural stormwater discharges, and return flows from irri
gated agriculture. A precipitation related discharge of manure,
litter, or process wastewater from land application areas under
the control of a CAFO is considered an agricultural stormwater
discharge when manure, litter, or process wastewater is ap
plied in accordance with site-specific nutrient management
practices that ensure appropriate agricultural utilization of the
nutrients in the manure, litter, or process wastewater.
(E) Operating Permit Applications. This section describes the
application process and requirements for CAFO operating per
mits. A separate application for each operating location must
be submitted to the department.
1. The department will not examine the adequacy or effi
ciency of the structural, mechanical, or electrical components
of the waste management systems, only adherence to rules
and regulations. The issuance of permits will not include ap
proval of such features.
2. The application shall include at a minimum the follow
ing documents:
A. Title page of engineering report or similar document
sealed by a professional engineer including name of the oper
ation, date the report was prepared, name and address of firm
preparing the report, seal and signature of the engineer, and a
statement indicating the project was designed in accordance
with 10 CSR 20-8.300;
B. Narrative project summary. This shall describe the
existing and any proposed modifications to operating condi
tions including the number of confinement buildings or areas,
the total design capacity in animal units and actual animal
numbers for each type of animal, and an explanation of the
existing and/or proposed modifications to the waste manage
ment system;
C. Include the amount of manure generated annually,
storage volume, and days of storage of all manure storage
structures, including mortality composter;
D. A recent aerial or topographic map showing the ex
tent of the production area including;
(I) All existing and proposed confinement buildings,
open lots, manure storage structures;
(II) Surface waters and areas subject to a one hundred
(100) year flood event within or adjacent to the production
area; and
(III) Production area setback distances in accordance
with 10 CSR 20-8.300(5)(B);
E. Nutrient Management Plan—
(I) NPDES permit – applications shall include the oper
ations’ nutrient management plan; or
(II) State no-discharge permit –applications for a new
permit shall include the operations’ nutrient management
plan;
F. Applications for Class I CAFOs shall also include:
(I) An aerial or topographic map that meets the re
quirement of 10 CSR 20-6.300(3)(C)4.;
(II) Proof of neighbor notice to all parties listed in 10
CSR 20-6.300(3)(C)2.
3. When an application is submitted incomplete or any of
the required permit documents are deficient, or if additional
information is needed including, but not limited to, engi
neering design plans, the department will act in one (1) of the
following ways:
A. The department may return the entire permit appli
cation back to the applicant for re-submittal; or
B. The applicant and/or the applicant’s engineer will be
notified of the deficiency and will be provided time to address
department comments and submit corrections. Processing of
the application may be placed on hold until the applicant has
corrected identified deficiencies.
4. Applicants who fail to correct deficiencies and/or fail
to satisfy all department comments after two (2) certified de
partment comment letters shall have the application returned
as incomplete and the permit fee(s) shall be forfeited. The
department will grant reasonable time extensions when the
applicant requests additional time to respond to department
comments, however, such requests must be in writing and
must occur within the time frame set by the department.
5. When the department has received all documents and
information necessary for a properly completed operating
permit application, including appropriate permit fees, the
department will, review the application and said documents
for compliance with this regulation and 10 CSR 20-8.300 and, if
met, act in one (1) of the following ways:
A. For an operation seeking coverage under the state
no-discharge general operating permit the department will
issue the state no-discharge general operating permit; or
B. For an operation seeking coverage under the NPDES
operating permit the department will post for fifteen (15) days
on the department’s webpage a notice of the pending CAFO
NPDES permit. The notice will include an announcement of
the opportunity for public review and comment on the CAFO’s
nutrient management plan and draft NPDES permit. The de
partment will consider all comments before issuing the oper
ating permit.
(3) Operating Permit Requirements. These requirements apply
to all operating permits unless otherwise specified.
(A) General Requirements.
1. All operating permits required by this rule shall be
issued in accordance with applicable provisions of 10 CSR 206.010, 10 CSR 20-6.011, 10 CSR 20-6.020, and 10 CSR 20-8.300.
When the state regulations referenced within these rules are
found to be incompatible with the requirements of 10 CSR 206.300, the provisions of 10 CSR 20-6.300 will take precedence.
2. In addition to the state requirements found in this rule,
all CAFO NPDES permits shall be issued in compliance with
applicable federal regulation as set forth in 40 CFR 122.42(e),
and 40 CFR 412, Subpart A through Subpart D, July 30, 2012,
incorporated by reference, without any later amendments or
additions, as published by the Office of the Federal Register,
National Archives and Records Administration, Superintendent
of Documents, Pittsburgh, PA 15250-7954.
3. Permits shall allow the CAFO to operate at a level of an
imal units not to exceed its respective class size (i.e., Class IC or
IB). When determining the appropriate classification, a rolling
twelve- (12-) month average method will be used. The rolling
twelve- (12-) month average shall at no time exceed the upper
threshold limit of the CAFO’s designated class size. CAFOs may
change animal numbers and weights within its respective class
size; however, such changes must not subsequently violate
applicable effluent limitations found in section (4) of this rule
or adversely impact the storage and handling capacities of the
waste management system and may be subject to other appro
priate conditions or limitations. If a Class I CAFO has reduced
animal numbers and is operating as a Class II or smaller AFO,
the operation may request termination of their operating per
mit. The rolling twelve- (12-) month average for the last twelve
(12) months shall be submitted with the termination request.
The department will then conduct an inspection to determine
if the permit can be terminated. If the operation increases ani
mal numbers to the Class I operating size, the owner or opera
tor of the CAFO shall apply for an operating permit.
4. Permits shall require the CAFO operator to provide the
recipient of any manure, litter, or process wastewater transfer,
a current manure nutrient analysis.
5. Mortalities must not be disposed of in any liquid manure
or process wastewater system, unless specifically designed to
handle them. Mortalities must be handled in such a way as to
prevent the discharge of pollutants to surface waters and pre
vent the creation of a public health hazard.
(B) Buffer Distances. Buffer distances shall be in accordance
with section 640.710, RSMo unless exempted below:
1. When a CAFO proposes an expansion or modification
but does not increase to a larger classification size, the buffer
distance requirements shall be applicable only to the proposed
confinement buildings and wastewater storage structures
unless exempted by paragraph 2. of this subsection. Neighbor
notice requirements of subsection (C) of this section shall apply
to all existing and proposed confinement buildings and waste
water storage structures. If the proposed expansion or modifi
cation results in an increase to a larger classification size, the
buffer distance and neighbor notice requirement of the larger
classification size will apply to all existing and proposed con
finement buildings and wastewater storage structures unless
exempted by paragraph 4. of this subsection.
2. A concentrated animal feeding operation and any future
modification or expansion of a CAFO is exempt from buffer
distance requirements, but not neighbor notice requirements,
when it meets all of the following criteria:
A. The CAFO was in existence prior to June 25, 1996; and
B. The CAFO does not expand to a larger classification
size.
3. When existing animal feeding operations or concen
trated animal feeding operations expand to a larger class size,
the buffer distances shall not apply to the portion of the oper
ation in existence as of June 25, 1996.
4. Buffer distances are not applicable to residences owned
by the concentrated animal feeding operation or a residence
from which a written agreement for operation is obtained from
the owner of that residence. When shorter buffer distances are
proposed by the operation and allowed by the department,
the written agreement for a shorter buffer distance shall be
recorded with the county recorder and filed in the chain of
title for the property of the land owner agreeing to the shorter
buffer distance.
(C) Neighbor Notice Requirements. Neighbor notice shall be
conducted in accordance with section 640.715, RSMo.
1. Acceptable forms of proof for submittal that neighbor
notice was sent include copies of mail delivery confirmation
receipts, return receipts, or other similar documentation.
2. All concentrated animal feeding operations shall sub
mit, as part of the operating permit application, an aerial
or topographic map of the production area. The maps shall
show the operation layout, buffer distances, property lines,
and property owners within one and one-half (1 1/2) times the
buffer distance.
3. The neighbor notice will expire if an operating permit
application has not been received by the department within
twelve (12) months of initiating the neighbor notice require
ments.
(D) Inspections.
1. Permits shall require the following minimum visual in
spections at the production area:
A. Weekly inspections of all storm water diversion
devices, runoff diversion structures, and devices channeling
contaminated storm water to the process wastewater storage;
B. Daily inspection of water lines, including wastewater,
drinking water, and cooling water lines that can be visually
observed within the production area. The inspection of the
drinking water and cooling water lines shall be limited to the
lines that possess the ability to leak or drain to wastewater stor
age structures or may come in contact with any process waste;
C. Weekly inspections of the manure, litter, and process
wastewater impoundments. The inspection will note the level
in liquid impoundments as indicated by the depth marker; and
D. Once per day when in use conduct leak inspections
on equipment used for land application of manure or process
wastewater.
2. Permits shall require the following minimum visual in
spections at the land application area:
A. Monitoring of the perimeter of the application fields
once per day during land application to ensure that applied
wastewater does not run off the fields where applied;
B. Monitor for drifting from spray irrigation; and
C. Hourly inspections of aboveground irrigation pipe
lines when in use.
3. Permits shall require that any deficiencies found as a
result of inspections be corrected as soon as possible.
(E) Record Keeping. This section pertains to all CAFO operat
ing permits. All records required by this section shall be made
available to the department upon request.
1. Permits shall require that the permittee maintain the
following records for the production area for a period of five (5)
years from the date they are created:
A. A copy of construction and operating permits, permit
applications, and the nutrient management plan;
B. A once-per-week record documenting the daily visual
inspections performed as required in 10 CSR 20-6.300(3)(D)
above;
C. Weekly records of the depth of the manure and pro
cess wastewater in the liquid impoundments as indicated by
the depth marker;
D. Records documenting any actions taken to correct
deficiencies. Deficiencies not corrected within thirty (30) days
shall be accompanied by an explanation of the factors prevent
ing immediate correction;
E. Records of mortalities management and practices
used by the operation which verify compliance with 10 CSR
20-6.300(3)(A)5. above;
F. Records of the date, time, and estimated volume of
any overflow; and
G. Records of the date, recipient name and address, and
approximate amount of manure, litter, or process wastewater
transferred to another person.
2. Permits shall require that the permittee maintain the
following records for the land application area for a period of
five (5) years from the date they are created:
A. Expected crop yields;
B. The date(s) manure, litter, or process wastewater is
applied to each field;
C. Weather conditions at time of application and for
twenty-four (24) hours prior to and following application;
D. Test methods used to sample and analyze manure,
litter, process wastewater, and soil;
E. Results from manure, litter, process wastewater, and
soil sampling;
F. Explanation of the basis for determining manure ap
plication rates, as provided in the technical standards;
G. Calculations showing the total nitrogen and phos
phorus to be applied to each field, including sources other
than manure, litter, or process wastewater;
H. Total amount of nitrogen and phosphorus actually
applied to each field, including documentation of calculations
for the total amount applied;
I. The method used to apply the manure, litter, or pro
cess wastewater; and
J. Date(s) of manure application equipment inspection.
(F) Annual Reports. This section is required for NPDES
operating permits only. Annual reports shall comply with
the federal regulation 40 CFR 122.42(e)(4), “Annual reporting
requirements for CAFOs,” Jan. 8, 2018, as published by the
Office of the Federal Register, National Archives and Records
Administration, Superintendent of Documents, Pittsburgh,
PA 15250-7954, which is hereby incorporated by reference and
does not include later amendments or additions.
(G) Best Management Practices (BMPs)—Each CAFO subject
to 10 CSR 20-6.300, that land applies manure, litter, or process
wastewater must do so in accordance with the following prac
tices:
1. Nutrient management plan. Operating permits shall
require a nutrient management plan be developed and imple
mented according to the requirements of 10 CSR 20-6.300(5).
The plan must also incorporate the requirements of paragraph
(3)(G)2. below. The CAFO must begin implementation of the
plan upon the date of operating permit coverage;
2. Manure, litter, and process wastewater applied to the
land application area must minimize phosphorus and nitrogen
transport from the field to surface waters in compliance with
the Missouri Concentrated Animal Feeding Operation Nutrient
Management Technical Standard (NMTS) approved by the Clean
Water Commission on March 4, 2009, in accordance with 40
CFR 123.36, as published by the Missouri Department of Natural
Resources, Division of Environmental Quality, Water Protection
Program, PO Box 176, Jefferson City, MO 65102-0176, which is
hereby incorporated by reference into this rule without any
later amendments or additions, or an alternative but equally
protective standard subsequently approved by the department
that includes, but is not limited to, the following:
A. Include a field-specific assessment of the potential
for phosphorus transport from the field to surface waters and
address the form, source, amount, timing, and method of appli
cation of nutrients on each field to achieve realistic production
goals, while minimizing nitrogen and phosphorus movement
to surface waters;
B. Include appropriate flexibilities for any CAFO to
implement nutrient management practices to comply with
the technical standards, including consideration of multiyear
phosphorus application on fields that do not have a high
potential for phosphorus runoff to surface water, phased im
plementation of phosphorus-based nutrient management,
and other components, as determined appropriate by the
department;
C. Require that manure be analyzed a minimum of once
annually for nitrogen and phosphorus content, and soil be an
alyzed a minimum of once every five (5) years for phosphorus
content. The results of these analyses are to be used in deter
mining application rates for manure, litter, and other process
wastewater;
D. Include conditions that will ensure manure, litter, and
process wastewater applications are conducted in a manner
that prevents surface runoff of process wastewater beyond the
edge of the field. Such measures will include, but not be lim
ited to, restricting the timing, soil conditions, and placement
of manure during land application; and
E. Include appropriate land application setbacks that at
a minimum require manure, litter, and process wastewater be
land applied not closer than one hundred feet (100') from any
down-gradient surface waters, open tile line intake structures,
sinkholes, agricultural well heads, or other conduits to surface
waters unless the operation complies with one (1) of the follow
ing compliance alternatives:
(I) For surface and subsurface applications, a setback
consisting of a thirty-five foot- (35'-) wide vegetated buffer
where applications of manure, litter, or process wastewater are
prohibited; or
(II) The CAFO demonstrates that a setback or buffer
is not necessary because implementation of alternative con
servation practices or field-specific conditions will provide
pollutant reductions equivalent or better than the reductions
that would be achieved by the one hundred foot (100') setback;
3. Land application shall occur during daylight hours only.
Night time applications shall only occur when the department
has approved the night time land application plan.
(H) Additional Requirements for Class IA CAFOs only.
Secondary containments shall be installed in accordance with
section 640.730, RSMo. Inspections shall be conducted in accor
dance with Section 640.725, RSMo, in addition to the following:
1. Inspections shall also include the structural integrity of
the collection system and containment structures along with
any unauthorized discharges from the flush and wet handling
systems. Records shall be maintained by the facility for a min
imum of three (3) years on forms approved by the department.
2. Secondary containment structure(s) or earthen dam(s)
shall be sized to contain a minimum volume equal to the
maximum capacity of flushing in any twenty-four- (24-) hour
period from all gravity outfall lines, recycle pump stations, and
recycle force mains.
3. Class IA concentrated animal feeding operations (both
new and those operations that wish to expand to Class IA size)
are prohibited from the watersheds of the Current, Jacks Fork,
and Eleven Point Rivers as described in 10 CSR 20-6.300(1)(B)9.D.
4. A record of inspections when the water level is less than
twelve inches (12") from the emergency spillway shall be in
cluded with the operations annual report.
(4) Design Standards and Effluent Limitations.
(A) Effluent Limitations Applicable to All Class I CAFOs.
1. New and expanding CAFOs shall be designed and con
structed in accordance with 10 CSR 20-8.300.
2. Effluent limits for subsurface waters shall be in accor
dance with 10 CSR 20-7.015(7)(E).
3. NPDES operating permits shall also comply with effluent
limitations as set forth in 40 CFR Part 412, Subpart A through
Subpart D, July 30, 2012, without any later amendments or
additions, as published by the Office of the Federal Register,
National Archives and Records Administration, Superintendent
of Documents, Pittsburgh, PA 15250-7954, which are hereby
incorporated by reference.
4. There shall be no discharge of manure, litter, or process
wastewater to waters of the state from a CAFO as a result of
the land application of manure, litter, or process wastewater
to land application areas under the operational control of
the CAFO, except where it is an agricultural storm water dis
charge. When manure, litter, or process wastewater has been
land applied in accordance with subsection (3)(G) of this rule,
a precipitation-related discharge of manure, litter, or process
wastewater from land areas under the control of the CAFO is
considered to be an agricultural storm water discharge.
5. A chronic weather event is a series of wet weather
events and conditions that can delay planting, harvesting, and
prevent land application and dewatering practices at waste
water storage structures. When wastewater storage structures
are in danger of an overflow due to a chronic weather event,
CAFO owners shall take reasonable steps to lower the liquid
level in the structure through land application, or other suit
able means, to prevent overflow from the storage structure.
Reasonable steps may include, but are not limited to, fol
lowing the department’s current guidance on “Wet Weather
Management Practices for CAFOs.” These practices shall be
designed specifically to protect water quality during wet
weather periods. A discharge resulting from a land application
conducted during wet weather conditions is not considered
an agricultural stormwater discharge and is subject to permit
requirements. The department will determine, within a rea
sonable time frame, when a chronic weather event is occurring
for any given county in Missouri. The determination will be
based upon an evaluation of the one-in-ten (1- in-10) year return
rainfall frequency over a ten- (10-) day, ninety- (90-) day, one
hundred eighty- (180-) day, and three hundred sixty five- (365-)
day operating period.
(B) Additional Limitations for State No-Discharge Operating
Permits.
1. There shall be no discharge of manure, litter, or process
wastewater into surface waters of the state from the produc
tion area.
2. If at any time a CAFO’s waste management system
is found to be discharging, the department may revoke the
CAFO’s no-discharge permit and require the CAFO to seek cov
erage under an NPDES permit.
3. If a discharge occurs at a CAFO with a state no-discharge
permit, the owner or operator must submit to the department
for review and approval the following documentation: a
description of the discharge, including the date, time, cause,
duration, and approximate volume of the discharge, and a
detailed explanation of the steps taken by the CAFO to perma
nently address the cause of the discharge that will ensure that
a discharge from this cause does not occur in the future.
4. When a discharge occurs at a CAFO, the CAFO will be
allowed to maintain coverage under the no-discharge permit
when the following two (2) conditions are met:
A. The department determines that the specific cause
has been appropriately corrected so that the CAFO does not
discharge; and
B. The CAFO has not had two (2) discharges at a given
site for the same cause in any five- (5-) year period.
5. If a CAFO has two (2) separate discharge events brought
about by the same cause, the department may terminate the
no-discharge permit in which case the CAFO will be required
to seek coverage under a NPDES permit.
(C) Effluent Limitations Applicable to Class II and Smaller
Sized AFOs. When a Class II or smaller sized AFO is designated
as a CAFO by the department, the specific effluent limitations
will be based upon the department’s best professional judg
ment. The specific effluent limits shall not be more stringent
than those for Class I CAFOs.
(5) Nutrient Management Plans (NMP)—In accordance with
paragraph (3)(G)1. of this rule, operating permits shall require
the development and implementation of a nutrient manage
ment plan. A portion of a CAFO’s nutrient management plan
includes the documents within a CAFO’s operating permit ap
plication and annual reports. The plan must comply with the
requirements found within the Nutrient Management Technical
Standard which will satisfy the criteria in subsections (G), (H),
and (I) below. The NMP shall be maintained according to the
requirements of paragraph (3)(G)2. of this rule. For NPDES per
mits only, any revisions to the NMP must be submitted to the
department for review with the changes from the previous
version identified. Substantial changes to the terms of the NMP
incorporated into the NPDES operating will require a permit
modification and a fifteen- (15-) day public notice period. The
plan must, at a minimum, address the following areas:
(A) Ensure adequate storage of manure, litter, and process
wastewater, including procedures to ensure proper operation
and maintenance of the storage facilities;
(B) Ensure proper management of mortalities (i.e., dead
animals) to ensure that they are not disposed of in a liquid
manure, storm water, or process wastewater storage or treat
ment system that is not specifically designed to treat animal
mortalities;
(C) Ensure that clean water is diverted, as appropriate, from
the production area. NMPs shall include, as necessary, controls,
measures, or BMPs to properly manage storm water runoff at
the operation. This would apply only to activities in or around
the land application or production area that is under the con
trol of the CAFO owner or operator, whether it is owned, rented,
or leased. Examples of such activities could include winter
feeding areas, stockpiling of manure and raw materials, or any
other regulated CAFO activity that will contribute pollutants to
waters of the state;
(D) Prevent direct contact of confined animals with waters
of the state;
(E) Ensure that chemicals and other contaminants handled
within animal production facilities are not disposed of in any
manure, litter, process wastewater, or storm water storage or
treatment system unless specifically designed to treat such
chemicals and other contaminants;
(F) Identify appropriate site-specific conservation practices
to be implemented, including as appropriate buffers or equiv
alent practices, to control runoff of pollutants to waters of the
state;
(G) Identify protocols for appropriate testing of manure, lit
ter, process wastewater, and soil;
(H) Establish protocols to land apply manure, litter, or process
wastewater in accordance with site specific nutrient manage
ment practices that ensure appropriate agricultural utilization
of the nutrients in the manure, litter, or process wastewater;
and
(I) Identify specific records that will be maintained to docu
ment the implementation and management of the minimum
elements described in subsections (A) through (H) of this sec
tion.
(6) Closure of Waste Storage Structures.
(A) Class I operations that cease operation, or plan to close
lagoons and other waste storage structures, shall comply with
10 CSR 20-6.010 as well as the requirements in this section—
1. Other concentrated animal feeding operations that
cease operation shall either close the waste storage structures
in accordance with the closure requirements in subsection (6)
(B) of this rule or shall continue to maintain all storage struc
tures so that there is not a discharge to waters of the state.
(B) Closure Requirements—
1. Lagoons and waste storage structures shall be closed
by removal and land application of all wastewater and sludge
at agricultural rates for fertilizer not to exceed the maximum
nutrient utilization of the land application site and vegetation
grown and shall be applied at controlled rates so that there will
be no discharge to waters of the state; and
2. After removal and proper land application of waste
water and sludge, the earthen basins may be demolished by
removing the berms, grading, and establish at least seventy
percent (70%) plant density over one hundred percent (100%) of
the site so as to provide erosion control, or the basin may be left
in place for future use as a farm pond or similar uses.
(7) Concentrated Animal Feeding Operation Indemnity Fund
for Class IA CAFO.
(A) Participation in the Concentrated Animal Feeding
Operating Indemnity Fund and its administration shall be in
accordance with sections 640.740 through 640.747, RSMo.
(B) For facilities permitted after June 25, 1996, the annual
fee shall commence on the first anniversary of the operating
permit
(C) In no event shall a refund exceed the unencumbered bal
ance in the Concentrated Animal Feeding Operation Indemnity
Fund.
(D) Each payment shall identify the following: state oper
ating permit number, payment period, and permittee’s name
and address. Persons who own or operate more than one (1)
operation may submit one (1) check to cover all annual fees,
but are responsible for submitting the appropriate information
to allow proper credit for each permit file account.
(E) Annual fees are the responsibility of the permittee. Failure
to receive a billing notice is not an excuse for failure to remit
the fees.
AUTHORITY: sections 640.710 and 644.026, RSMo 2016.* Original
rule filed June 1, 1995, effective Jan. 30, 1996. Amended: Filed
March 1, 1996, effective Nov. 30, 1996. Amended: Filed July 9, 1998,
effective March 30, 1999. Amended: Filed May 12, 2008, effective
Feb. 28, 2009. Amended: Filed July 14, 2011, effective April 30, 2012.
Amended: Filed Jan. 26, 2016, effective Oct. 30, 2016. Amended:
Filed June 13, 2018, effective Feb. 28, 2019. **
*Original authority: 640.710, RSMo 1996 and 644.026, RSMo 1972, amended 1973,
1987, 1993, 1995, 2000, 2012, 2014.
**Pursuant to Executive Order 21-07, 10 CSR 20-6.300, subsection (2)(B) and paragraphs (3)(A)3., (3)
(B)1., and (4)(A)1. was suspended from April 23, 2020 through August 31, 2021.